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Items: 1 to 20 of 5912

1.
Neural manifold under plasticity in a goal driven learning behaviour
Barbara Feulner, Claudia Clopath
PLoS Comput Biol. 2021 Feb; 17(2): e1008621. Published online 2021 Feb 5. doi: 10.1371/journal.pcbi.1008621
PMCID:
PMC7864452
ArticlePDF–2.4M
2.
Effect of intake manifold geometry on cylinder-to-cylinder variation and tumble enhancement in gasoline direct injection engine
Jisoo Shin, Donghwan Kim, Yousang Son, Sungwook Park
Sci Rep. 2022; 12: 19862. Published online 2022 Nov 18. doi: 10.1038/s41598-022-24079-8
PMCID:
PMC9674660
ArticlePDF–9.1M
3.
Decoding brain states on the intrinsic manifold of human brain dynamics across wakefulness and sleep
Joan Rué-Queralt, Angus Stevner, Enzo Tagliazucchi, Helmut Laufs, Morten L. Kringelbach, Gustavo Deco, Selen Atasoy
Commun Biol. 2021; 4: 854. Published online 2021 Jul 9. doi: 10.1038/s42003-021-02369-7
PMCID:
PMC8270946
ArticlePDF–3.0M
4.
Neural manifold analysis of brain circuit dynamics in health and disease
Rufus Mitchell-Heggs, Seigfred Prado, Giuseppe P. Gava, Mary Ann Go, Simon R. Schultz
J Comput Neurosci. 2023; 51(1): 1–21. Published online 2022 Dec 16. doi: 10.1007/s10827-022-00839-3
PMCID:
PMC9840597
ArticlePDF–4.2M
5.
A measure for the identification of preferred particle orientations in cryo-electron microscopy data:
A simulation study
Ryota Kojima, Takashi Yoshidome
Biophys Physicobiol. 2021; 18: 96–107. Published online 2021 Apr 16. doi: 10.2142/biophysico.bppb-v18.011
PMCID:
PMC8116199
ArticlePDF–8.7M
6.
Information geometry of multiparameter models: New perspectives on the origin of simplicity
Katherine N. Quinn, Michael C. Abbott, Mark K. Transtrum, Benjamin B. Machta, James P. Sethna
Rep Prog Phys. Author manuscript; available in PMC 2023 Dec 28.
Published in final edited form as: Rep Prog Phys. 2022 Dec 28; 86(3): 10.1088/1361-6633/aca6f8. Published online 2022 Dec 28. doi: 10.1088/1361-6633/aca6f8
PMCID:
PMC10018491
ArticlePDF–4.1M
7.
A Riemannian Geometry Theory of Synergy Selection for Visually-Guided Movement
Peter D. Neilson, Megan D. Neilson, Robin T. Bye
Vision (Basel) 2021 Jun; 5(2): 26. Published online 2021 May 25. doi: 10.3390/vision5020026
PMCID:
PMC8163178
ArticlePDF–4.0M
8.
Interpolated functional manifold for functional near-infrared spectroscopy analysis at group level
Shender-María Ávila-Sansores, Gustavo Rodríguez-Gómez, Ilias Tachtsidis, Felipe Orihuela-Espina
Neurophotonics. 2020 Oct; 7(4): 045009. Published online 2020 Nov 27. doi: 10.1117/1.NPh.7.4.045009
PMCID:
PMC7695443
ArticlePDF–5.8M
9.
Nonlinear manifolds underlie neural population activity during behaviour
Cátia Fortunato, Jorge Bennasar-Vázquez, Junchol Park, Joanna C. Chang, Lee E. Miller, Joshua T. Dudman, Matthew G. Perich, Juan A. Gallego
Version 2. bioRxiv. Preprint. 2023 Jul 21. doi: 10.1101/2023.07.18.549575
PMCID:
PMC10370078
ArticlePDF–11M
10.
A Riemannian Geometry Theory of Three-Dimensional Binocular Visual Perception
Peter D. Neilson, Megan D. Neilson, Robin T. Bye
Vision (Basel) 2018 Dec; 2(4): 43. Published online 2018 Dec 5. doi: 10.3390/vision2040043
PMCID:
PMC6836267
ArticlePDF–4.2M
11.
Simultaneous Measurements of Noncommuting Observables: Positive Transformations and Instrumental Lie Groups
Christopher S. Jackson, Carlton M. Caves
Entropy (Basel) 2023 Sep; 25(9): 1254. Published online 2023 Aug 23. doi: 10.3390/e25091254
PMCID:
PMC10529125
ArticlePDF–732K
12.
Toroidal topology of population activity in grid cells
Richard J. Gardner, Erik Hermansen, Marius Pachitariu, Yoram Burak, Nils A. Baas, Benjamin A. Dunn, May-Britt Moser, Edvard I. Moser
Nature. 2022; 602(7895): 123–128. Published online 2022 Jan 12. doi: 10.1038/s41586-021-04268-7
PMCID:
PMC8810387
ArticlePDF–13M
13.
Conformational Heterogeneity and the Affinity of Substrate Molecular Recognition by Cytochrome P450cam
Edward J. Basom, Bryce A. Manifold, Megan C. Thielges
Biochemistry. Author manuscript; available in PMC 2018 Jun 27.
Published in final edited form as: Biochemistry. 2017 Jun 27; 56(25): 3248–3256. Published online 2017 Jun 14. doi: 10.1021/acs.biochem.7b00238
PMCID:
PMC5816979
ArticlePDF–631K
14.
Thought Chart: tracking the thought with manifold learning during emotion regulation
Mengqi Xing, Johnson GadElkarim, Olusola Ajilore, Ouri Wolfson, Angus Forbes, K. Luan Phan, Heide Klumpp, Alex Leow
Brain Inform. 2018 Dec; 5(2): 7. Published online 2018 Jul 19. doi: 10.1186/s40708-018-0085-y
PMCID:
PMC6170936
ArticlePDF–3.6M
15.
An Elementary Introduction to Information Geometry
Frank Nielsen
Entropy (Basel) 2020 Oct; 22(10): 1100. Published online 2020 Sep 29. doi: 10.3390/e22101100
PMCID:
PMC7650632
ArticlePDF–2.4M
16.
Geometric basis of action potential of skeletal muscle cells and neurons
Qing Li
Open Life Sci. 2022; 17(1): 1191–1199. Published online 2022 Sep 16. doi: 10.1515/biol-2022-0488
PMCID:
PMC9482420
ArticlePDF–432K
17.
Inference and analysis of cell-cell communication using CellChat
Suoqin Jin, Christian F. Guerrero-Juarez, Lihua Zhang, Ivan Chang, Raul Ramos, Chen-Hsiang Kuan, Peggy Myung, Maksim V. Plikus, Qing Nie
Nat Commun. 2021; 12: 1088. Published online 2021 Feb 17. doi: 10.1038/s41467-021-21246-9
PMCID:
PMC7889871
ArticlePDF–15M
18.
Neural excursions from manifold structure explain patterns of learning during human sensorimotor adaptation
Corson Areshenkoff, Daniel J Gale, Dominic Standage, Joseph Y Nashed, J Randall Flanagan, Jason P Gallivan
eLife. 2022; 11: e74591. Published online 2022 Apr 19. doi: 10.7554/eLife.74591
PMCID:
PMC9018069
ArticlePDF–4.4M
19.
Flexible regulation of representations on a drifting manifold enables long-term stable complex neuroprosthetic control
Nikhilesh Natraj, Sarah Seko, Reza Abiri, Hongyi Yan, Yasmin Graham, Adelyn Tu-Chan, Edward F. Chang, Karunesh Ganguly
Version 1. bioRxiv. Preprint. 2023 Aug 14. doi: 10.1101/2023.08.11.551770
PMCID:
PMC10462094
ArticlePDF–57M
20.
Engineering recurrent neural networks from task-relevant manifolds and dynamics
Eli Pollock, Mehrdad Jazayeri
PLoS Comput Biol. 2020 Aug; 16(8): e1008128. Published online 2020 Aug 12. doi: 10.1371/journal.pcbi.1008128
PMCID:
PMC7446915
ArticlePDF–2.8M

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